Detalhe da pesquisa
1.
Comprehensive transcriptome analysis reveals altered mRNA splicing and post-transcriptional changes in the aged mouse brain.
Nucleic Acids Res
; 52(6): 2865-2885, 2024 Apr 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-38471806
2.
Sequential disruption of SPLASH-identified vRNA-vRNA interactions challenges their role in influenza A virus genome packaging.
Nucleic Acids Res
; 51(12): 6479-6494, 2023 07 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-37224537
3.
Taxonomic classification of DNA sequences beyond sequence similarity using deep neural networks.
Proc Natl Acad Sci U S A
; 119(35): e2122636119, 2022 08 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-36018838
4.
Functional comparisons of the virus sensor RIG-I from humans, the microbat Myotis daubentonii, and the megabat Rousettus aegyptiacus, and their response to SARS-CoV-2 infection.
J Virol
; 97(10): e0020523, 2023 10 31.
Artigo
em Inglês
| MEDLINE | ID: mdl-37728614
5.
Genome Structure, Life Cycle, and Taxonomy of Coronaviruses and the Evolution of SARS-CoV-2.
Curr Top Microbiol Immunol
; 439: 305-339, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-36592250
6.
VIRify: An integrated detection, annotation and taxonomic classification pipeline using virus-specific protein profile hidden Markov models.
PLoS Comput Biol
; 19(8): e1011422, 2023 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-37639475
7.
Genomic analysis of 61 Chlamydia psittaci strains reveals extensive divergence associated with host preference.
BMC Genomics
; 24(1): 288, 2023 May 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-37248517
8.
De novo genome assembly resolving repetitive structures enables genomic analysis of 35 European Mycoplasmopsis bovis strains.
BMC Genomics
; 24(1): 548, 2023 Sep 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-37715127
9.
Assembling highly repetitive Xanthomonas TALomes using Oxford Nanopore sequencing.
BMC Genomics
; 24(1): 151, 2023 Mar 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-36973643
10.
Comparative Study of Ten Thogotovirus Isolates and Their Distinct In Vivo Characteristics.
J Virol
; 96(5): e0155621, 2022 03 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-35019718
11.
A genome-wide CRISPR activation screen reveals Hexokinase 1 as a critical factor in promoting resistance to multi-kinase inhibitors in hepatocellular carcinoma cells.
FASEB J
; 36(3): e22191, 2022 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-35147243
12.
Streptomyces marispadix sp. nov., isolated from marine beach sediment.
Int J Syst Evol Microbiol
; 73(7)2023 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-37489568
13.
Rfam 14: expanded coverage of metagenomic, viral and microRNA families.
Nucleic Acids Res
; 49(D1): D192-D200, 2021 01 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-33211869
14.
Direct RNA nanopore sequencing of full-length coronavirus genomes provides novel insights into structural variants and enables modification analysis.
Genome Res
; 29(9): 1545-1554, 2019 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-31439691
15.
Comparative transcriptomics identifies candidate genes involved in the evolutionary transition from dehiscent to indehiscent fruits in Lepidium (Brassicaceae).
BMC Plant Biol
; 22(1): 340, 2022 Jul 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-35836106
16.
PoSeiDon: a Nextflow pipeline for the detection of evolutionary recombination events and positive selection.
Bioinformatics
; 37(7): 1018-1020, 2021 05 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-32735310
17.
VIDHOP, viral host prediction with deep learning.
Bioinformatics
; 37(3): 318-325, 2021 04 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-32777818
18.
EpiDope: a deep neural network for linear B-cell epitope prediction.
Bioinformatics
; 37(4): 448-455, 2021 05 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-32915967
19.
HIV-1 Lethality and Loss of Env Protein Expression Induced by Single Synonymous Substitutions in the Virus Genome Intronic-Splicing Silencer.
J Virol
; 94(21)2020 10 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-32817222
20.
A marine Chlamydomonas sp. emerging as an algal model.
J Phycol
; 57(1): 54-69, 2021 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-33043442